Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Gm11643-201ENSMUST00000119578 864 ntBASIC19.68■□□□□ 0.74
Trim47Q8C0E3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Mir5122-201ENSMUST00000175004 89 ntBASIC19.68■□□□□ 0.74
Trim47Q8C0E3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim47Q8C0E3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.67■□□□□ 0.74
Trim47Q8C0E3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Gm37055-201ENSMUST00000191866 133 ntBASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim47Q8C0E3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Idnk-204ENSMUST00000226010 1898 ntBASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Gm13401-201ENSMUST00000117074 291 ntBASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim47Q8C0E3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim47Q8C0E3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Trim47Q8C0E3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trim47Q8C0E3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim47Q8C0E3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trim47Q8C0E3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
Trim47Q8C0E3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Gm10517-202ENSMUST00000192970 758 ntBASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim47Q8C0E3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim47Q8C0E3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim47Q8C0E3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim47Q8C0E3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim47Q8C0E3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim47Q8C0E3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim47Q8C0E3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms