Protein–RNA interactions for Protein: Q8BYI9

Tnr, Tenascin-R, mousemouse

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnrQ8BYI9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Gm11355-201ENSMUST00000121120 306 ntBASIC23.08■■□□□ 1.29
TnrQ8BYI9 Gm11950-201ENSMUST00000121615 838 ntBASIC23.08■■□□□ 1.29
TnrQ8BYI9 Gm18958-201ENSMUST00000174258 762 ntBASIC23.08■■□□□ 1.29
TnrQ8BYI9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TnrQ8BYI9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TnrQ8BYI9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Gm5784-201ENSMUST00000179344 2478 ntBASIC23.07■■□□□ 1.28
TnrQ8BYI9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC23.07■■□□□ 1.28
TnrQ8BYI9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TnrQ8BYI9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Gm27357-201ENSMUST00000183754 135 ntBASIC23.06■■□□□ 1.28
TnrQ8BYI9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Gm7461-201ENSMUST00000058918 827 ntBASIC23.06■■□□□ 1.28
TnrQ8BYI9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TnrQ8BYI9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TnrQ8BYI9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TnrQ8BYI9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TnrQ8BYI9 Gm7153-201ENSMUST00000117092 455 ntBASIC23.02■■□□□ 1.28
TnrQ8BYI9 Gm11860-201ENSMUST00000122346 1010 ntBASIC23.02■■□□□ 1.28
TnrQ8BYI9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TnrQ8BYI9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
TnrQ8BYI9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TnrQ8BYI9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TnrQ8BYI9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TnrQ8BYI9 Gm26039-201ENSMUST00000158152 144 ntBASIC23.01■■□□□ 1.27
TnrQ8BYI9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC23.01■■□□□ 1.27
TnrQ8BYI9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TnrQ8BYI9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC23■■□□□ 1.27
TnrQ8BYI9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TnrQ8BYI9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TnrQ8BYI9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TnrQ8BYI9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC23■■□□□ 1.27
TnrQ8BYI9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TnrQ8BYI9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TnrQ8BYI9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TnrQ8BYI9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TnrQ8BYI9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TnrQ8BYI9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms