Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Gm26571-201ENSMUST00000181399 666 ntBASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Gm42569-201ENSMUST00000200539 472 ntBASIC17.15■□□□□ 0.34
Cpne3Q8BT60 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne3Q8BT60 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.14■□□□□ 0.34
Cpne3Q8BT60 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Gm6365-201ENSMUST00000054711 744 ntBASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne3Q8BT60 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne3Q8BT60 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cpne3Q8BT60 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cpne3Q8BT60 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne3Q8BT60 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms