Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ppp1r3eQ8BRJ4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ppp1r3eQ8BRJ4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ppp1r3eQ8BRJ4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ppp1r3eQ8BRJ4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ppp1r3eQ8BRJ4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
Ppp1r3eQ8BRJ4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gm13234-201ENSMUST00000120010 747 ntBASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ppp1r3eQ8BRJ4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.61■□□□□ 0.25
Ppp1r3eQ8BRJ4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ppp1r3eQ8BRJ4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ppp1r3eQ8BRJ4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ppp1r3eQ8BRJ4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms