Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Scfd1Q8BRF7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scfd1Q8BRF7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scfd1Q8BRF7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scfd1Q8BRF7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Gm24841-201ENSMUST00000158676 357 ntBASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.32■□□□□ 0.84
Scfd1Q8BRF7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Fst-202ENSMUST00000223640 2612 ntBASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scfd1Q8BRF7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scfd1Q8BRF7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Gm18959-201ENSMUST00000208954 655 ntBASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scfd1Q8BRF7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scfd1Q8BRF7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms