Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Gm20049-201ENSMUST00000219950 730 ntBASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4Q8BQZ5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cpsf4Q8BQZ5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4Q8BQZ5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Cpsf4Q8BQZ5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cpsf4Q8BQZ5 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4Q8BQZ5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms