Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcaf1Q8BNE1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Tcaf1Q8BNE1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcaf1Q8BNE1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tcaf1Q8BNE1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Mir5122-201ENSMUST00000175004 89 ntBASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.14■□□□□ 0.65
Tcaf1Q8BNE1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tcaf1Q8BNE1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcaf1Q8BNE1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms