Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Csnk1a1Q8BK63 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Gm12441-201ENSMUST00000121806 588 ntBASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.8■□□□□ 0.12
Csnk1a1Q8BK63 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Gm12896-201ENSMUST00000118430 226 ntBASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Gm11927-201ENSMUST00000118472 759 ntBASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Csnk1a1Q8BK63 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Gm29257-201ENSMUST00000186115 639 ntBASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Csnk1a1Q8BK63 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Csnk1a1Q8BK63 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 Dio3-201ENSMUST00000097228 1449 ntBASIC15.77■□□□□ 0.11
Csnk1a1Q8BK63 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Csnk1a1Q8BK63 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Csnk1a1Q8BK63 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.76■□□□□ 0.11
Csnk1a1Q8BK63 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Csnk1a1Q8BK63 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms