Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.86■□□□□ 0.61
Usp1Q8BJQ2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp1Q8BJQ2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Usp1Q8BJQ2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp1Q8BJQ2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp1Q8BJQ2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Gm7889-201ENSMUST00000185591 958 ntBASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp1Q8BJQ2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp1Q8BJQ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp1Q8BJQ2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp1Q8BJQ2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp1Q8BJQ2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp1Q8BJQ2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp1Q8BJQ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp1Q8BJQ2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp1Q8BJQ2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms