Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh20Q8BIZ0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh20Q8BIZ0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh20Q8BIZ0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh20Q8BIZ0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh20Q8BIZ0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdh20Q8BIZ0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh20Q8BIZ0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh20Q8BIZ0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh20Q8BIZ0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdh20Q8BIZ0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh20Q8BIZ0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdh20Q8BIZ0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms