Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SpidrQ8BGX7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Gm13474-201ENSMUST00000122466 815 ntBASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SpidrQ8BGX7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SpidrQ8BGX7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SpidrQ8BGX7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SpidrQ8BGX7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Gm25016-201ENSMUST00000158399 131 ntBASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.7■□□□□ 0.9
SpidrQ8BGX7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Ank2-226ENSMUST00000189368 339 ntBASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Gm21559-201ENSMUST00000220638 855 ntBASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Gm8587-201ENSMUST00000076538 843 ntBASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SpidrQ8BGX7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SpidrQ8BGX7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SpidrQ8BGX7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SpidrQ8BGX7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SpidrQ8BGX7 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.68■□□□□ 0.9
SpidrQ8BGX7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.68■□□□□ 0.9
SpidrQ8BGX7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.68■□□□□ 0.9
SpidrQ8BGX7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms