Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.49■□□□□ 0.39
Ubp1Q811S7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.49■□□□□ 0.39
Ubp1Q811S7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.48■□□□□ 0.39
Ubp1Q811S7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubp1Q811S7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.47■□□□□ 0.39
Ubp1Q811S7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubp1Q811S7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.46■□□□□ 0.39
Ubp1Q811S7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubp1Q811S7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.45■□□□□ 0.38
Ubp1Q811S7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.45■□□□□ 0.38
Ubp1Q811S7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.45■□□□□ 0.38
Ubp1Q811S7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.45■□□□□ 0.38
Ubp1Q811S7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubp1Q811S7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.44■□□□□ 0.38
Ubp1Q811S7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.44■□□□□ 0.38
Ubp1Q811S7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms