Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim50Q810I2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim50Q810I2 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.33■□□□□ 0.36
Trim50Q810I2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim50Q810I2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim50Q810I2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim50Q810I2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim50Q810I2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim50Q810I2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim50Q810I2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim50Q810I2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim50Q810I2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim50Q810I2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.31■□□□□ 0.36
Trim50Q810I2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trim50Q810I2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim50Q810I2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim50Q810I2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trim50Q810I2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim50Q810I2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim50Q810I2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim50Q810I2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.31■□□□□ 0.36
Trim50Q810I2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim50Q810I2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim50Q810I2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim50Q810I2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.3■□□□□ 0.36
Trim50Q810I2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim50Q810I2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.3■□□□□ 0.36
Trim50Q810I2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Trim50Q810I2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim50Q810I2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim50Q810I2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim50Q810I2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim50Q810I2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim50Q810I2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim50Q810I2 Gm11249-201ENSMUST00000117071 859 ntBASIC17.29■□□□□ 0.36
Trim50Q810I2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Gm27275-201ENSMUST00000184318 272 ntBASIC17.29■□□□□ 0.36
Trim50Q810I2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim50Q810I2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim50Q810I2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.29■□□□□ 0.36
Trim50Q810I2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim50Q810I2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trim50Q810I2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.28■□□□□ 0.36
Trim50Q810I2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.28■□□□□ 0.36
Trim50Q810I2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim50Q810I2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trim50Q810I2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim50Q810I2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim50Q810I2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim50Q810I2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim50Q810I2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim50Q810I2 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.27■□□□□ 0.36
Trim50Q810I2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim50Q810I2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim50Q810I2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim50Q810I2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim50Q810I2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms