Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm3Q80WV7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Gm4968-201ENSMUST00000071458 858 ntBASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Srrm3Q80WV7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.46■□□□□ 0.55
Srrm3Q80WV7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
Srrm3Q80WV7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.45■□□□□ 0.54
Srrm3Q80WV7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Srrm3Q80WV7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Mir6982-201ENSMUST00000184354 68 ntBASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms