Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Trim62Q80V85 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.39■□□□□ 0.54
Trim62Q80V85 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim62Q80V85 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim62Q80V85 Gm37292-201ENSMUST00000192062 758 ntBASIC18.39■□□□□ 0.53
Trim62Q80V85 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim62Q80V85 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim62Q80V85 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim62Q80V85 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim62Q80V85 Gm43183-201ENSMUST00000200632 547 ntBASIC18.38■□□□□ 0.53
Trim62Q80V85 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Trim62Q80V85 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim62Q80V85 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim62Q80V85 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim62Q80V85 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim62Q80V85 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.36■□□□□ 0.53
Trim62Q80V85 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim62Q80V85 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim62Q80V85 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.36■□□□□ 0.53
Trim62Q80V85 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim62Q80V85 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim62Q80V85 Fst-202ENSMUST00000223640 2612 ntBASIC18.36■□□□□ 0.53
Trim62Q80V85 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim62Q80V85 Gm6576-201ENSMUST00000169678 883 ntBASIC18.35■□□□□ 0.53
Trim62Q80V85 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim62Q80V85 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim62Q80V85 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim62Q80V85 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim62Q80V85 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim62Q80V85 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.34■□□□□ 0.53
Trim62Q80V85 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim62Q80V85 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim62Q80V85 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim62Q80V85 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim62Q80V85 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms