Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Gm5417-201ENSMUST00000079706 384 ntBASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh8Q7TSK3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh8Q7TSK3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh8Q7TSK3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh8Q7TSK3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh8Q7TSK3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh8Q7TSK3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh8Q7TSK3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdh8Q7TSK3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms