Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Idnk-204ENSMUST00000226010 1898 ntBASIC17.29■□□□□ 0.36
Scn4bQ7M729 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.29■□□□□ 0.36
Scn4bQ7M729 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.29■□□□□ 0.36
Scn4bQ7M729 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn4bQ7M729 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Gm11927-201ENSMUST00000118472 759 ntBASIC17.28■□□□□ 0.36
Scn4bQ7M729 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.28■□□□□ 0.36
Scn4bQ7M729 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.28■□□□□ 0.36
Scn4bQ7M729 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.28■□□□□ 0.36
Scn4bQ7M729 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.28■□□□□ 0.36
Scn4bQ7M729 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn4bQ7M729 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Gm12441-201ENSMUST00000121806 588 ntBASIC17.27■□□□□ 0.36
Scn4bQ7M729 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn4bQ7M729 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn4bQ7M729 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn4bQ7M729 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Scn4bQ7M729 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Scn4bQ7M729 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn4bQ7M729 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.27■□□□□ 0.35
Scn4bQ7M729 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Gm2559-201ENSMUST00000201323 363 ntBASIC17.26■□□□□ 0.35
Scn4bQ7M729 Mtag2-201ENSMUST00000058665 714 ntBASIC17.26■□□□□ 0.35
Scn4bQ7M729 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn4bQ7M729 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.25■□□□□ 0.35
Scn4bQ7M729 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn4bQ7M729 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.25■□□□□ 0.35
Scn4bQ7M729 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms