Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm8Q6ZWM4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm8Q6ZWM4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Mir8112-201ENSMUST00000184382 131 ntBASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Gm29257-201ENSMUST00000186115 639 ntBASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm8Q6ZWM4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Gm18666-201ENSMUST00000190039 958 ntBASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Lsm8Q6ZWM4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm8Q6ZWM4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm8Q6ZWM4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Gm13401-201ENSMUST00000117074 291 ntBASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.58■□□□□ 0.56
Lsm8Q6ZWM4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms