Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Gm27742-201ENSMUST00000184667 60 ntBASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Scn10aQ6QIY3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn10aQ6QIY3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Mzt1-203ENSMUST00000227948 952 ntBASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Scn10aQ6QIY3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn10aQ6QIY3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn10aQ6QIY3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Olfr129-201ENSMUST00000122318 993 ntBASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn10aQ6QIY3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms