Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc2Q6PDG5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Smarcc2Q6PDG5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc2Q6PDG5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.69■□□□□ 0.9
Smarcc2Q6PDG5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc2Q6PDG5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.67■□□□□ 0.9
Smarcc2Q6PDG5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcc2Q6PDG5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Gm11927-201ENSMUST00000118472 759 ntBASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcc2Q6PDG5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarcc2Q6PDG5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smarcc2Q6PDG5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarcc2Q6PDG5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Smarcc2Q6PDG5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms