Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp200Q6P4T2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp200Q6P4T2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp200Q6P4T2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Gm21814-202ENSMUST00000203277 873 ntBASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp200Q6P4T2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp200Q6P4T2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp200Q6P4T2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Snrnp200Q6P4T2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp200Q6P4T2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.77■□□□□ 0.27
Snrnp200Q6P4T2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp200Q6P4T2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp200Q6P4T2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms