Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sik3Q6P4S6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.21■□□□□ 0.99
Sik3Q6P4S6 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.21■□□□□ 0.99
Sik3Q6P4S6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Sik3Q6P4S6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sik3Q6P4S6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sik3Q6P4S6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Gm18959-201ENSMUST00000208954 655 ntBASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sik3Q6P4S6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sik3Q6P4S6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sik3Q6P4S6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sik3Q6P4S6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sik3Q6P4S6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sik3Q6P4S6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sik3Q6P4S6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sik3Q6P4S6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.15■□□□□ 0.98
Sik3Q6P4S6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms