Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Mir6349-201ENSMUST00000184059 97 ntBASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Gm20049-201ENSMUST00000219950 730 ntBASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Hdac4Q6NZM9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac4Q6NZM9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac4Q6NZM9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Gm13401-201ENSMUST00000117074 291 ntBASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Gm15375-201ENSMUST00000119510 849 ntBASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Mir8112-201ENSMUST00000184382 131 ntBASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac4Q6NZM9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hdac4Q6NZM9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac4Q6NZM9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.83■□□□□ 0.77
Hdac4Q6NZM9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hdac4Q6NZM9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac4Q6NZM9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac4Q6NZM9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac4Q6NZM9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac4Q6NZM9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac4Q6NZM9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms