Protein–RNA interactions for Protein: Q6NS45

Ccdc66, Coiled-coil domain-containing protein 66, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc66Q6NS45 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc66Q6NS45 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc66Q6NS45 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Gm26571-201ENSMUST00000181399 666 ntBASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc66Q6NS45 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Gm7291-201ENSMUST00000199147 382 ntBASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc66Q6NS45 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.54■□□□□ 0.88
Ccdc66Q6NS45 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc66Q6NS45 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc66Q6NS45 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Gm10849-201ENSMUST00000100397 618 ntBASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc66Q6NS45 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc66Q6NS45 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc66Q6NS45 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc66Q6NS45 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc66Q6NS45 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms