Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Gm27389-201ENSMUST00000183622 195 ntBASIC21.13■□□□□ 0.97
Ltn1Q6A009 Gm21559-201ENSMUST00000220638 855 ntBASIC21.13■□□□□ 0.97
Ltn1Q6A009 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Gm8587-201ENSMUST00000076538 843 ntBASIC21.13■□□□□ 0.97
Ltn1Q6A009 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ltn1Q6A009 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.12■□□□□ 0.97
Ltn1Q6A009 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ltn1Q6A009 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ltn1Q6A009 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
Ltn1Q6A009 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.11■□□□□ 0.97
Ltn1Q6A009 Gm10566-201ENSMUST00000086739 996 ntBASIC21.11■□□□□ 0.97
Ltn1Q6A009 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ltn1Q6A009 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ltn1Q6A009 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ltn1Q6A009 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ltn1Q6A009 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Gm7213-201ENSMUST00000215977 950 ntBASIC21.1■□□□□ 0.97
Ltn1Q6A009 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.1■□□□□ 0.97
Ltn1Q6A009 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Gm18958-201ENSMUST00000174258 762 ntBASIC21.1■□□□□ 0.97
Ltn1Q6A009 Gm18669-201ENSMUST00000216049 778 ntBASIC21.1■□□□□ 0.97
Ltn1Q6A009 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ltn1Q6A009 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Gm7153-201ENSMUST00000117092 455 ntBASIC21.09■□□□□ 0.97
Ltn1Q6A009 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ltn1Q6A009 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Gm11950-201ENSMUST00000121615 838 ntBASIC21.08■□□□□ 0.97
Ltn1Q6A009 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ltn1Q6A009 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ltn1Q6A009 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ltn1Q6A009 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ltn1Q6A009 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.08■□□□□ 0.96
Ltn1Q6A009 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.07■□□□□ 0.96
Ltn1Q6A009 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.07■□□□□ 0.96
Ltn1Q6A009 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms