Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.62■□□□□ 0.57
Scube3Q66PY1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube3Q66PY1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scube3Q66PY1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.6■□□□□ 0.57
Scube3Q66PY1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.6■□□□□ 0.57
Scube3Q66PY1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Scube3Q66PY1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.59■□□□□ 0.57
Scube3Q66PY1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube3Q66PY1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube3Q66PY1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Idnk-204ENSMUST00000226010 1898 ntBASIC18.58■□□□□ 0.57
Scube3Q66PY1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Scube3Q66PY1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Scube3Q66PY1 Mir1199-201ENSMUST00000117015 119 ntBASIC18.58■□□□□ 0.56
Scube3Q66PY1 Gm11643-201ENSMUST00000119578 864 ntBASIC18.58■□□□□ 0.56
Scube3Q66PY1 Gm12382-201ENSMUST00000122005 922 ntBASIC18.58■□□□□ 0.56
Scube3Q66PY1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.58■□□□□ 0.56
Scube3Q66PY1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube3Q66PY1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube3Q66PY1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube3Q66PY1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms