Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col11a2Q64739 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
Col11a2Q64739 Gm13884-201ENSMUST00000118103 829 ntBASIC21.64■■□□□ 1.06
Col11a2Q64739 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.64■■□□□ 1.06
Col11a2Q64739 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Col11a2Q64739 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col11a2Q64739 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.64■■□□□ 1.05
Col11a2Q64739 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col11a2Q64739 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col11a2Q64739 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.64■■□□□ 1.05
Col11a2Q64739 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col11a2Q64739 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Col11a2Q64739 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Col11a2Q64739 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col11a2Q64739 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Col11a2Q64739 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col11a2Q64739 Gm43514-201ENSMUST00000198852 424 ntBASIC21.62■■□□□ 1.05
Col11a2Q64739 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Col11a2Q64739 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col11a2Q64739 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Col11a2Q64739 Gm27459-201ENSMUST00000184860 107 ntBASIC21.61■■□□□ 1.05
Col11a2Q64739 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col11a2Q64739 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.61■■□□□ 1.05
Col11a2Q64739 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col11a2Q64739 Gm5867-201ENSMUST00000063197 592 ntBASIC21.61■■□□□ 1.05
Col11a2Q64739 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col11a2Q64739 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.61■■□□□ 1.05
Col11a2Q64739 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col11a2Q64739 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Gm6623-201ENSMUST00000173570 544 ntBASIC21.6■■□□□ 1.05
Col11a2Q64739 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Mir8098-201ENSMUST00000184011 137 ntBASIC21.6■■□□□ 1.05
Col11a2Q64739 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.6■■□□□ 1.05
Col11a2Q64739 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Col11a2Q64739 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col11a2Q64739 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Col11a2Q64739 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Col11a2Q64739 Gm28659-201ENSMUST00000188013 759 ntBASIC21.59■■□□□ 1.05
Col11a2Q64739 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.59■■□□□ 1.05
Col11a2Q64739 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col11a2Q64739 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.58■■□□□ 1.05
Col11a2Q64739 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col11a2Q64739 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.58■■□□□ 1.05
Col11a2Q64739 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col11a2Q64739 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col11a2Q64739 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col11a2Q64739 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col11a2Q64739 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Col11a2Q64739 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
Col11a2Q64739 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col11a2Q64739 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
Col11a2Q64739 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Col11a2Q64739 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.58■■□□□ 1.04
Col11a2Q64739 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Col11a2Q64739 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
Col11a2Q64739 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Col11a2Q64739 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Col11a2Q64739 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.57■■□□□ 1.04
Col11a2Q64739 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Col11a2Q64739 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Gm15794-201ENSMUST00000120182 631 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms