Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Irf4Q64287 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Irf4Q64287 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 Gm21814-202ENSMUST00000203277 873 ntBASIC17.43■□□□□ 0.38
Irf4Q64287 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Irf4Q64287 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf4Q64287 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Irf4Q64287 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Irf4Q64287 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.42■□□□□ 0.38
Irf4Q64287 Gm10517-202ENSMUST00000192970 758 ntBASIC17.42■□□□□ 0.38
Irf4Q64287 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.42■□□□□ 0.38
Irf4Q64287 Timm23-208ENSMUST00000226683 750 ntBASIC17.42■□□□□ 0.38
Irf4Q64287 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.42■□□□□ 0.38
Irf4Q64287 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Irf4Q64287 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf4Q64287 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Irf4Q64287 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.41■□□□□ 0.38
Irf4Q64287 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.41■□□□□ 0.38
Irf4Q64287 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.41■□□□□ 0.38
Irf4Q64287 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf4Q64287 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.41■□□□□ 0.38
Irf4Q64287 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Irf4Q64287 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.41■□□□□ 0.38
Irf4Q64287 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.4■□□□□ 0.38
Irf4Q64287 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Irf4Q64287 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Irf4Q64287 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.4■□□□□ 0.38
Irf4Q64287 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Irf4Q64287 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf4Q64287 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Irf4Q64287 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.39■□□□□ 0.37
Irf4Q64287 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Gm13401-201ENSMUST00000117074 291 ntBASIC17.39■□□□□ 0.37
Irf4Q64287 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.39■□□□□ 0.37
Irf4Q64287 Odf3b-204ENSMUST00000227834 930 ntBASIC17.39■□□□□ 0.37
Irf4Q64287 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.39■□□□□ 0.37
Irf4Q64287 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Irf4Q64287 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Irf4Q64287 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Irf4Q64287 Gm10418-201ENSMUST00000100943 576 ntBASIC17.38■□□□□ 0.37
Irf4Q64287 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Irf4Q64287 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.38■□□□□ 0.37
Irf4Q64287 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.38■□□□□ 0.37
Irf4Q64287 Gm3375-201ENSMUST00000203929 796 ntBASIC17.38■□□□□ 0.37
Irf4Q64287 Gm29791-202ENSMUST00000207888 369 ntBASIC17.38■□□□□ 0.37
Irf4Q64287 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.38■□□□□ 0.37
Irf4Q64287 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Irf4Q64287 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Irf4Q64287 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms