Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col7a1Q63870 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.84□□□□□ -0.03
Col7a1Q63870 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.84□□□□□ -0.03
Col7a1Q63870 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.84□□□□□ -0.03
Col7a1Q63870 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Col7a1Q63870 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col7a1Q63870 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col7a1Q63870 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.84□□□□□ -0.03
Col7a1Q63870 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col7a1Q63870 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.83□□□□□ -0.03
Col7a1Q63870 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col7a1Q63870 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.83□□□□□ -0.03
Col7a1Q63870 Gm27321-201ENSMUST00000185021 205 ntBASIC14.83□□□□□ -0.03
Col7a1Q63870 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Col7a1Q63870 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col7a1Q63870 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col7a1Q63870 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col7a1Q63870 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.82□□□□□ -0.04
Col7a1Q63870 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.82□□□□□ -0.04
Col7a1Q63870 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.82□□□□□ -0.04
Col7a1Q63870 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col7a1Q63870 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.81□□□□□ -0.04
Col7a1Q63870 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.81□□□□□ -0.04
Col7a1Q63870 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col7a1Q63870 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.81□□□□□ -0.04
Col7a1Q63870 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col7a1Q63870 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col7a1Q63870 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.8□□□□□ -0.04
Col7a1Q63870 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.8□□□□□ -0.04
Col7a1Q63870 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.8□□□□□ -0.04
Col7a1Q63870 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
Col7a1Q63870 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Col7a1Q63870 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Col7a1Q63870 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col7a1Q63870 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col7a1Q63870 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col7a1Q63870 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms