Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SspnQ62147 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.86□□□□□ -0.03
SspnQ62147 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SspnQ62147 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.86□□□□□ -0.03
SspnQ62147 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SspnQ62147 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.85□□□□□ -0.03
SspnQ62147 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SspnQ62147 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SspnQ62147 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.85□□□□□ -0.03
SspnQ62147 Gm22325-201ENSMUST00000158904 308 ntBASIC14.85□□□□□ -0.03
SspnQ62147 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.85□□□□□ -0.03
SspnQ62147 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Tgds-204ENSMUST00000228543 1594 ntBASIC14.85□□□□□ -0.03
SspnQ62147 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.85□□□□□ -0.03
SspnQ62147 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SspnQ62147 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SspnQ62147 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
SspnQ62147 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.84□□□□□ -0.03
SspnQ62147 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SspnQ62147 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SspnQ62147 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.83□□□□□ -0.03
SspnQ62147 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SspnQ62147 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SspnQ62147 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SspnQ62147 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SspnQ62147 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SspnQ62147 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.83□□□□□ -0.04
SspnQ62147 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Gm26571-201ENSMUST00000181399 666 ntBASIC14.83□□□□□ -0.04
SspnQ62147 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SspnQ62147 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SspnQ62147 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.83□□□□□ -0.04
SspnQ62147 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Gm6365-201ENSMUST00000054711 744 ntBASIC14.83□□□□□ -0.04
SspnQ62147 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SspnQ62147 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
SspnQ62147 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SspnQ62147 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.82□□□□□ -0.04
SspnQ62147 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SspnQ62147 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SspnQ62147 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
SspnQ62147 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.82□□□□□ -0.04
SspnQ62147 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SspnQ62147 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.82□□□□□ -0.04
SspnQ62147 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SspnQ62147 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SspnQ62147 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SspnQ62147 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SspnQ62147 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms