Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Gm23935-201ENSMUST00000102303 57 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Gm24270-201ENSMUST00000102326 57 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Gm11452-201ENSMUST00000122376 690 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Gm24245-201ENSMUST00000157318 57 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Gm14057-201ENSMUST00000120631 482 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.72■□□□□ 0.27
VcanQ62059 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.72■□□□□ 0.27
VcanQ62059 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VcanQ62059 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Gm10418-201ENSMUST00000100943 576 ntBASIC16.71■□□□□ 0.27
VcanQ62059 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VcanQ62059 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.71■□□□□ 0.27
VcanQ62059 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VcanQ62059 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
VcanQ62059 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.71■□□□□ 0.27
VcanQ62059 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.71■□□□□ 0.27
VcanQ62059 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VcanQ62059 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.71■□□□□ 0.27
VcanQ62059 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
VcanQ62059 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VcanQ62059 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VcanQ62059 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
VcanQ62059 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VcanQ62059 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.7■□□□□ 0.26
VcanQ62059 Gm6736-201ENSMUST00000166583 948 ntBASIC16.7■□□□□ 0.26
VcanQ62059 Gm18195-201ENSMUST00000207604 706 ntBASIC16.7■□□□□ 0.26
VcanQ62059 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
VcanQ62059 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VcanQ62059 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.7■□□□□ 0.26
VcanQ62059 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VcanQ62059 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VcanQ62059 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VcanQ62059 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VcanQ62059 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VcanQ62059 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VcanQ62059 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VcanQ62059 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.69■□□□□ 0.26
VcanQ62059 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VcanQ62059 Iqck-206ENSMUST00000208658 2891 ntBASIC16.69■□□□□ 0.26
VcanQ62059 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VcanQ62059 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.69■□□□□ 0.26
VcanQ62059 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.69■□□□□ 0.26
VcanQ62059 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VcanQ62059 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
VcanQ62059 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VcanQ62059 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.68■□□□□ 0.26
VcanQ62059 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
VcanQ62059 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.68■□□□□ 0.26
VcanQ62059 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
VcanQ62059 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.68■□□□□ 0.26
VcanQ62059 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.68■□□□□ 0.26
VcanQ62059 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
VcanQ62059 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.68■□□□□ 0.26
VcanQ62059 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
VcanQ62059 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
VcanQ62059 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VcanQ62059 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
VcanQ62059 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VcanQ62059 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VcanQ62059 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VcanQ62059 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VcanQ62059 Olfr129-201ENSMUST00000122318 993 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms