Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctr9Q62018 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ctr9Q62018 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctr9Q62018 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.89■□□□□ 0.94
Ctr9Q62018 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ctr9Q62018 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ctr9Q62018 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctr9Q62018 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctr9Q62018 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ctr9Q62018 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctr9Q62018 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ctr9Q62018 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctr9Q62018 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ctr9Q62018 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ctr9Q62018 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ctr9Q62018 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ctr9Q62018 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ctr9Q62018 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.88■□□□□ 0.93
Ctr9Q62018 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Ctr9Q62018 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ctr9Q62018 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.88■□□□□ 0.93
Ctr9Q62018 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ctr9Q62018 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctr9Q62018 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.87■□□□□ 0.93
Ctr9Q62018 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Gm21814-202ENSMUST00000203277 873 ntBASIC20.87■□□□□ 0.93
Ctr9Q62018 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ctr9Q62018 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ctr9Q62018 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ctr9Q62018 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctr9Q62018 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ctr9Q62018 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.86■□□□□ 0.93
Ctr9Q62018 Gm15565-201ENSMUST00000118890 427 ntBASIC20.86■□□□□ 0.93
Ctr9Q62018 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.86■□□□□ 0.93
Ctr9Q62018 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctr9Q62018 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.86■□□□□ 0.93
Ctr9Q62018 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctr9Q62018 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ctr9Q62018 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.85■□□□□ 0.93
Ctr9Q62018 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.85■□□□□ 0.93
Ctr9Q62018 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ctr9Q62018 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.85■□□□□ 0.93
Ctr9Q62018 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctr9Q62018 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.85■□□□□ 0.93
Ctr9Q62018 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms