Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.48■□□□□ 0.39
Cacna1eQ61290 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1eQ61290 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1eQ61290 Gm25016-201ENSMUST00000158399 131 ntBASIC17.47■□□□□ 0.39
Cacna1eQ61290 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.47■□□□□ 0.39
Cacna1eQ61290 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.47■□□□□ 0.39
Cacna1eQ61290 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1eQ61290 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.46■□□□□ 0.39
Cacna1eQ61290 Gm13474-201ENSMUST00000122466 815 ntBASIC17.46■□□□□ 0.39
Cacna1eQ61290 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1eQ61290 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1eQ61290 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1eQ61290 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1eQ61290 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cacna1eQ61290 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.44■□□□□ 0.38
Cacna1eQ61290 Gm9731-201ENSMUST00000209480 747 ntBASIC17.44■□□□□ 0.38
Cacna1eQ61290 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1eQ61290 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1eQ61290 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1eQ61290 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1eQ61290 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cacna1eQ61290 Gm9103-201ENSMUST00000119371 405 ntBASIC17.43■□□□□ 0.38
Cacna1eQ61290 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1eQ61290 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms