Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col11a1Q61245 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col11a1Q61245 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col11a1Q61245 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Col11a1Q61245 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20■□□□□ 0.79
Col11a1Q61245 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col11a1Q61245 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col11a1Q61245 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col11a1Q61245 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Col11a1Q61245 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.99■□□□□ 0.79
Col11a1Q61245 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col11a1Q61245 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col11a1Q61245 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col11a1Q61245 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col11a1Q61245 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col11a1Q61245 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Col11a1Q61245 Mir8098-201ENSMUST00000184011 137 ntBASIC19.99■□□□□ 0.79
Col11a1Q61245 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col11a1Q61245 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col11a1Q61245 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col11a1Q61245 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col11a1Q61245 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Col11a1Q61245 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col11a1Q61245 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Gm26039-201ENSMUST00000158152 144 ntBASIC19.97■□□□□ 0.79
Col11a1Q61245 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.97■□□□□ 0.79
Col11a1Q61245 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Col11a1Q61245 Birc2-201ENSMUST00000054878 378 ntBASIC19.97■□□□□ 0.79
Col11a1Q61245 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.97■□□□□ 0.79
Col11a1Q61245 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col11a1Q61245 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col11a1Q61245 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.97■□□□□ 0.79
Col11a1Q61245 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.97■□□□□ 0.79
Col11a1Q61245 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col11a1Q61245 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Col11a1Q61245 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.96■□□□□ 0.79
Col11a1Q61245 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Col11a1Q61245 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col11a1Q61245 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col11a1Q61245 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.95■□□□□ 0.78
Col11a1Q61245 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.95■□□□□ 0.78
Col11a1Q61245 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col11a1Q61245 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Col11a1Q61245 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Col11a1Q61245 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.95■□□□□ 0.78
Col11a1Q61245 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col11a1Q61245 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Col11a1Q61245 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.94■□□□□ 0.78
Col11a1Q61245 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.94■□□□□ 0.78
Col11a1Q61245 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.94■□□□□ 0.78
Col11a1Q61245 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col11a1Q61245 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.93■□□□□ 0.78
Col11a1Q61245 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.93■□□□□ 0.78
Col11a1Q61245 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col11a1Q61245 Gm13884-201ENSMUST00000118103 829 ntBASIC19.93■□□□□ 0.78
Col11a1Q61245 Gm6623-201ENSMUST00000173570 544 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms