Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC25.74■■□□□ 1.71
Ptch1Q61115 Gm29791-202ENSMUST00000207888 369 ntBASIC25.74■■□□□ 1.71
Ptch1Q61115 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC25.74■■□□□ 1.71
Ptch1Q61115 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptch1Q61115 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptch1Q61115 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptch1Q61115 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptch1Q61115 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ptch1Q61115 Gm27525-201ENSMUST00000184465 107 ntBASIC25.73■■□□□ 1.71
Ptch1Q61115 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ptch1Q61115 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ptch1Q61115 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC25.72■■□□□ 1.71
Ptch1Q61115 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Ptch1Q61115 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC25.72■■□□□ 1.71
Ptch1Q61115 AC124569.2-201ENSMUST00000225998 818 ntBASIC25.72■■□□□ 1.71
Ptch1Q61115 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.72■■□□□ 1.71
Ptch1Q61115 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC25.72■■□□□ 1.71
Ptch1Q61115 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptch1Q61115 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Ptch1Q61115 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
Ptch1Q61115 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
Ptch1Q61115 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Ptch1Q61115 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC25.71■■□□□ 1.71
Ptch1Q61115 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Ptch1Q61115 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptch1Q61115 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Ptch1Q61115 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ptch1Q61115 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ptch1Q61115 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ptch1Q61115 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ptch1Q61115 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC25.7■■□□□ 1.7
Ptch1Q61115 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC25.7■■□□□ 1.7
Ptch1Q61115 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ptch1Q61115 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ptch1Q61115 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ptch1Q61115 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
Ptch1Q61115 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC25.69■■□□□ 1.7
Ptch1Q61115 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Ighv6-1-201ENSMUST00000193612 343 ntBASIC25.69■■□□□ 1.7
Ptch1Q61115 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Ptch1Q61115 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptch1Q61115 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptch1Q61115 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptch1Q61115 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptch1Q61115 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ptch1Q61115 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC25.68■■□□□ 1.7
Ptch1Q61115 Gm43347-201ENSMUST00000200226 580 ntBASIC25.68■■□□□ 1.7
Ptch1Q61115 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC25.68■■□□□ 1.7
Ptch1Q61115 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC25.68■■□□□ 1.7
Ptch1Q61115 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptch1Q61115 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptch1Q61115 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ptch1Q61115 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptch1Q61115 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptch1Q61115 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptch1Q61115 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC25.67■■□□□ 1.7
Ptch1Q61115 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptch1Q61115 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptch1Q61115 Cxcl14-202ENSMUST00000224801 1467 ntBASIC25.66■■□□□ 1.7
Ptch1Q61115 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ptch1Q61115 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC25.66■■□□□ 1.7
Ptch1Q61115 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC25.66■■□□□ 1.7
Ptch1Q61115 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ptch1Q61115 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ptch1Q61115 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC25.66■■□□□ 1.7
Ptch1Q61115 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ptch1Q61115 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC25.65■■□□□ 1.7
Ptch1Q61115 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC25.65■■□□□ 1.7
Ptch1Q61115 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms