Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sdf4Q61112 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sdf4Q61112 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Sdf4Q61112 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sdf4Q61112 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sdf4Q61112 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Sdf4Q61112 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Sdf4Q61112 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sdf4Q61112 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Gm27275-201ENSMUST00000184318 272 ntBASIC18.01■□□□□ 0.47
Sdf4Q61112 Gm10138-203ENSMUST00000206952 366 ntBASIC18.01■□□□□ 0.47
Sdf4Q61112 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdf4Q61112 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Gm10418-201ENSMUST00000100943 576 ntBASIC18■□□□□ 0.47
Sdf4Q61112 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sdf4Q61112 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdf4Q61112 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sdf4Q61112 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Sdf4Q61112 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sdf4Q61112 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sdf4Q61112 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.99■□□□□ 0.47
Sdf4Q61112 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.99■□□□□ 0.47
Sdf4Q61112 Gm13158-201ENSMUST00000122007 736 ntBASIC17.99■□□□□ 0.47
Sdf4Q61112 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Mtag2-201ENSMUST00000058665 714 ntBASIC17.99■□□□□ 0.47
Sdf4Q61112 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sdf4Q61112 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sdf4Q61112 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdf4Q61112 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sdf4Q61112 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Gm12527-201ENSMUST00000117967 564 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Mir6349-201ENSMUST00000184059 97 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Trmt13-210ENSMUST00000198454 880 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Grk6-206ENSMUST00000224995 2971 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.98■□□□□ 0.47
Sdf4Q61112 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdf4Q61112 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.98■□□□□ 0.47
Sdf4Q61112 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sdf4Q61112 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sdf4Q61112 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
Sdf4Q61112 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms