Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Gm37292-201ENSMUST00000192062 758 ntBASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tnfaip3Q60769 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Gm12382-201ENSMUST00000122005 922 ntBASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfaip3Q60769 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Tnfaip3Q60769 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfaip3Q60769 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Gm715-201ENSMUST00000117865 831 ntBASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Gm11643-201ENSMUST00000119578 864 ntBASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfaip3Q60769 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms