Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
Atp13a4Q5XF90 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a4Q5XF90 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a4Q5XF90 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Mir6349-201ENSMUST00000184059 97 ntBASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a4Q5XF90 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Gm29791-202ENSMUST00000207888 369 ntBASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a4Q5XF90 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Atp13a4Q5XF90 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp13a4Q5XF90 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Gm5643-201ENSMUST00000117081 966 ntBASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Atp13a4Q5XF90 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms