Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ubr3Q5U430 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ubr3Q5U430 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Gm27459-201ENSMUST00000184860 107 ntBASIC21.68■■□□□ 1.06
Ubr3Q5U430 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ubr3Q5U430 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.67■■□□□ 1.06
Ubr3Q5U430 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ubr3Q5U430 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr3Q5U430 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.66■■□□□ 1.06
Ubr3Q5U430 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Gm25925-201ENSMUST00000158314 306 ntBASIC21.66■■□□□ 1.06
Ubr3Q5U430 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr3Q5U430 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Birc2-201ENSMUST00000054878 378 ntBASIC21.65■■□□□ 1.06
Ubr3Q5U430 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr3Q5U430 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.65■■□□□ 1.06
Ubr3Q5U430 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Gm43514-201ENSMUST00000198852 424 ntBASIC21.64■■□□□ 1.06
Ubr3Q5U430 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubr3Q5U430 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr3Q5U430 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr3Q5U430 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr3Q5U430 Gm15794-201ENSMUST00000120182 631 ntBASIC21.64■■□□□ 1.05
Ubr3Q5U430 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr3Q5U430 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.64■■□□□ 1.05
Ubr3Q5U430 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.63■■□□□ 1.05
Ubr3Q5U430 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr3Q5U430 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ubr3Q5U430 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr3Q5U430 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.62■■□□□ 1.05
Ubr3Q5U430 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Gm6623-201ENSMUST00000173570 544 ntBASIC21.62■■□□□ 1.05
Ubr3Q5U430 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Gm28659-201ENSMUST00000188013 759 ntBASIC21.62■■□□□ 1.05
Ubr3Q5U430 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Ubr3Q5U430 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr3Q5U430 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr3Q5U430 Mir8098-201ENSMUST00000184011 137 ntBASIC21.61■■□□□ 1.05
Ubr3Q5U430 Gm5867-201ENSMUST00000063197 592 ntBASIC21.61■■□□□ 1.05
Ubr3Q5U430 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr3Q5U430 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.61■■□□□ 1.05
Ubr3Q5U430 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr3Q5U430 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ubr3Q5U430 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Gm13884-201ENSMUST00000118103 829 ntBASIC21.6■■□□□ 1.05
Ubr3Q5U430 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms