Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Shroom1Q5SX79 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.89■□□□□ 0.62
Shroom1Q5SX79 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Shroom1Q5SX79 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Gm12382-201ENSMUST00000122005 922 ntBASIC18.89■□□□□ 0.61
Shroom1Q5SX79 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Timm23-208ENSMUST00000226683 750 ntBASIC18.89■□□□□ 0.61
Shroom1Q5SX79 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom1Q5SX79 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom1Q5SX79 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Shroom1Q5SX79 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Gm10231-201ENSMUST00000181584 441 ntBASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Gm10175-202ENSMUST00000208752 441 ntBASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Gm30025-201ENSMUST00000218555 728 ntBASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom1Q5SX79 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Gm3375-201ENSMUST00000203929 796 ntBASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom1Q5SX79 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Mir2861-201ENSMUST00000175539 82 ntBASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms