Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-1Q5R1I8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-1Q5R1I8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-1Q5R1I8 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-1Q5R1I8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms