Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf43Q5NCP0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf43Q5NCP0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Gm18101-201ENSMUST00000215769 548 ntBASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf43Q5NCP0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf43Q5NCP0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Gm4974-201ENSMUST00000209974 875 ntBASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf43Q5NCP0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf43Q5NCP0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf43Q5NCP0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf43Q5NCP0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf43Q5NCP0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf43Q5NCP0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf43Q5NCP0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms