Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Trim41Q5NCC3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Trim41Q5NCC3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Trim41Q5NCC3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Trim41Q5NCC3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Gm43353-201ENSMUST00000199224 1295 ntBASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Gm45058-201ENSMUST00000205810 766 ntBASIC30.8■■■□□ 2.52
Trim41Q5NCC3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Trim41Q5NCC3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim41Q5NCC3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trim41Q5NCC3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC30.77■■■□□ 2.52
Trim41Q5NCC3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trim41Q5NCC3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Trim41Q5NCC3 Gm10418-201ENSMUST00000100943 576 ntBASIC30.76■■■□□ 2.51
Trim41Q5NCC3 AC132104.2-201ENSMUST00000215011 266 ntBASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Gm18669-201ENSMUST00000216049 778 ntBASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Trim41Q5NCC3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Gm25016-201ENSMUST00000158399 131 ntBASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Trim41Q5NCC3 Gm37820-201ENSMUST00000194021 2147 ntBASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Trim41Q5NCC3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Trim41Q5NCC3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Trim41Q5NCC3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Trim41Q5NCC3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Trim41Q5NCC3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Trim41Q5NCC3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC30.72■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms