Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Gm10493-201ENSMUST00000097270 612 ntBASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Gm38205-201ENSMUST00000192243 258 ntBASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clhc1Q5M6W3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clhc1Q5M6W3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Gm42778-201ENSMUST00000199644 553 ntBASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clhc1Q5M6W3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Reep4-203ENSMUST00000226563 1444 ntBASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clhc1Q5M6W3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clhc1Q5M6W3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clhc1Q5M6W3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms