Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13aQ5H8C4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps13aQ5H8C4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps13aQ5H8C4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vps13aQ5H8C4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Gm7638-201ENSMUST00000121348 967 ntBASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vps13aQ5H8C4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Gm11452-201ENSMUST00000122376 690 ntBASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps13aQ5H8C4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps13aQ5H8C4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms