Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
R3hdm4Q4VBF2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
R3hdm4Q4VBF2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3hdm4Q4VBF2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3hdm4Q4VBF2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3hdm4Q4VBF2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
R3hdm4Q4VBF2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3hdm4Q4VBF2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Gm11643-201ENSMUST00000119578 864 ntBASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3hdm4Q4VBF2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3hdm4Q4VBF2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3hdm4Q4VBF2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.1■□□□□ 0.65
R3hdm4Q4VBF2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3hdm4Q4VBF2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3hdm4Q4VBF2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms