Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
Pds5bQ4VA53 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pds5bQ4VA53 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Gm27702-201ENSMUST00000184512 56 ntBASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Gm2213-201ENSMUST00000197485 688 ntBASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Pds5bQ4VA53 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pds5bQ4VA53 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 AC125350.1-201ENSMUST00000225115 903 ntBASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
Pds5bQ4VA53 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Gm29791-202ENSMUST00000207888 369 ntBASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pds5bQ4VA53 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
Pds5bQ4VA53 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC31.07■■■□□ 2.57
Pds5bQ4VA53 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Pds5bQ4VA53 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Mir5131-201ENSMUST00000175426 93 ntBASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC31.06■■■□□ 2.56
Pds5bQ4VA53 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Gm11779-201ENSMUST00000118541 368 ntBASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Pds5bQ4VA53 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pds5bQ4VA53 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Pds5bQ4VA53 AC154855.1-201ENSMUST00000227353 1458 ntBASIC31.03■■■□□ 2.56
Pds5bQ4VA53 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Pds5bQ4VA53 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC31.03■■■□□ 2.56
Pds5bQ4VA53 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
Pds5bQ4VA53 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Gm12350-201ENSMUST00000121208 462 ntBASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Pds5bQ4VA53 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Pds5bQ4VA53 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC31.01■■■□□ 2.55
Pds5bQ4VA53 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Pds5bQ4VA53 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC31.01■■■□□ 2.55
Pds5bQ4VA53 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Pds5bQ4VA53 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Pds5bQ4VA53 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC31■■■□□ 2.55
Pds5bQ4VA53 Gm7862-201ENSMUST00000121461 292 ntBASIC31■■■□□ 2.55
Pds5bQ4VA53 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC31■■■□□ 2.55
Pds5bQ4VA53 AC159093.1-201ENSMUST00000227779 380 ntBASIC31■■■□□ 2.55
Pds5bQ4VA53 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Pds5bQ4VA53 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Pds5bQ4VA53 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Pds5bQ4VA53 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC30.99■■■□□ 2.55
Pds5bQ4VA53 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC30.99■■■□□ 2.55
Pds5bQ4VA53 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Pds5bQ4VA53 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Pds5bQ4VA53 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms