Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx49Q4FZF3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx49Q4FZF3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Gm17971-201ENSMUST00000190239 806 ntBASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx49Q4FZF3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx49Q4FZF3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx49Q4FZF3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ddx49Q4FZF3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.58■□□□□ 0.88
Ddx49Q4FZF3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx49Q4FZF3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx49Q4FZF3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx49Q4FZF3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Gm16061-201ENSMUST00000122167 857 ntBASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx49Q4FZF3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx49Q4FZF3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms