Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Syne3Q4FZC9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syne3Q4FZC9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syne3Q4FZC9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syne3Q4FZC9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syne3Q4FZC9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syne3Q4FZC9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Gm2399-201ENSMUST00000104944 225 ntBASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Syne3Q4FZC9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syne3Q4FZC9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syne3Q4FZC9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms