Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Gm38027-201ENSMUST00000192315 235 ntBASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Gm29791-202ENSMUST00000207888 369 ntBASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf38aQ4FK66 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf38aQ4FK66 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Gm10231-201ENSMUST00000181584 441 ntBASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Gm10175-202ENSMUST00000208752 441 ntBASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf38aQ4FK66 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Prpf38aQ4FK66 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Prpf38aQ4FK66 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf38aQ4FK66 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms